File: C:/Users/fred/anaconda3/Lib/site-packages/pywt/tests/data/generate_matlab_data_cwt.py
""" This script was used to generate dwt_matlabR2012a_result.npz by storing
the outputs from Matlab R2012a. """
import numpy as np
import pywt
try:
from pymatbridge import Matlab
mlab = Matlab()
_matlab_missing = False
except ImportError:
print("To run Matlab compatibility tests you need to have MathWorks "
"MATLAB, MathWorks Wavelet Toolbox and the pymatbridge Python "
"package installed.")
_matlab_missing = True
if _matlab_missing:
raise OSError("Can't generate matlab data files without MATLAB")
size_set = 'reduced'
# list of mode names in pywt and matlab
modes = [('zero', 'zpd'),
('constant', 'sp0'),
('symmetric', 'sym'),
('periodic', 'ppd'),
('smooth', 'sp1'),
('periodization', 'per')]
families = ('gaus', 'mexh', 'morl', 'cgau', 'shan', 'fbsp', 'cmor')
wavelets = sum([pywt.wavelist(name) for name in families], [])
rstate = np.random.RandomState(1234)
mlab.start()
try:
all_matlab_results = {}
for wavelet in wavelets:
w = pywt.ContinuousWavelet(wavelet)
if np.any((wavelet == np.array(['shan', 'cmor'])),axis=0):
mlab.set_variable('wavelet', wavelet+str(w.bandwidth_frequency)+'-'+str(w.center_frequency))
elif wavelet == 'fbsp':
mlab.set_variable('wavelet', wavelet+str(w.fbsp_order)+'-'+str(w.bandwidth_frequency)+'-'+str(w.center_frequency))
else:
mlab.set_variable('wavelet', wavelet)
if size_set == 'full':
data_sizes = list(range(100, 101)) + \
[100, 200, 500, 1000, 50000]
Scales = (1,np.arange(1,3),np.arange(1,4),np.arange(1,5))
else:
data_sizes = (1000, 1000 + 1)
Scales = (1,np.arange(1,3))
mlab_code = ("psi = wavefun(wavelet,10)")
res = mlab.run_code(mlab_code)
if not res['success']:
raise RuntimeError(
"Matlab failed to execute the provided code. "
"Check that the wavelet toolbox is installed.")
psi = np.asarray(mlab.get_variable('psi'))
psi_key = '_'.join([wavelet, 'psi'])
all_matlab_results[psi_key] = psi
for N in data_sizes:
data = rstate.randn(N)
mlab.set_variable('data', data)
# Matlab result
scale_count = 0
for scales in Scales:
scale_count += 1
mlab.set_variable('scales', scales)
mlab_code = ("coefs = cwt(data, scales, wavelet)")
res = mlab.run_code(mlab_code)
if not res['success']:
raise RuntimeError(
"Matlab failed to execute the provided code. "
"Check that the wavelet toolbox is installed.")
# need np.asarray because sometimes the output is type float
coefs = np.asarray(mlab.get_variable('coefs'))
coefs_key = '_'.join([str(scale_count), wavelet, str(N), 'coefs'])
all_matlab_results[coefs_key] = coefs
finally:
mlab.stop()
np.savez('cwt_matlabR2015b_result.npz', **all_matlab_results)