File: C:/Users/fred/anaconda3/Lib/site-packages/statsmodels/tsa/tests/test_tsa_tools.py
"""tests for some time series analysis functions
"""
from statsmodels.compat.pandas import (
PD_LT_2_2_0,
QUARTER_END,
YEAR_END,
assert_frame_equal,
assert_series_equal,
)
import numpy as np
from numpy.testing import (
assert_array_almost_equal,
assert_array_equal,
assert_equal,
assert_raises,
)
import pandas as pd
from pandas.tseries.frequencies import to_offset
import pytest
from statsmodels import regression
from statsmodels.datasets import macrodata
from statsmodels.tsa import stattools
from statsmodels.tsa.tests.results import savedrvs
from statsmodels.tsa.tests.results.datamlw_tls import (
mlacf,
mlccf,
mlpacf,
mlywar,
)
import statsmodels.tsa.tsatools as tools
from statsmodels.tsa.tsatools import vec, vech
xo = savedrvs.rvsdata.xar2
x100 = xo[-100:] / 1000.0
x1000 = xo / 1000.0
def test_acf():
acf_x = stattools.acf(x100, adjusted=False, fft=False, nlags=20)
assert_array_almost_equal(mlacf.acf100.ravel(), acf_x, 8) # why only dec=8
acf_x = stattools.acf(x1000, adjusted=False, fft=False, nlags=20)
assert_array_almost_equal(
mlacf.acf1000.ravel(), acf_x, 8
) # why only dec=9
def test_ccf():
ccf_x = stattools.ccf(x100[4:], x100[:-4], adjusted=False)[:21]
assert_array_almost_equal(mlccf.ccf100.ravel()[:21][::-1], ccf_x, 8)
ccf_x = stattools.ccf(x1000[4:], x1000[:-4], adjusted=False)[:21]
assert_array_almost_equal(mlccf.ccf1000.ravel()[:21][::-1], ccf_x, 8)
def test_pacf_yw():
pacfyw = stattools.pacf_yw(x100, 20, method="mle")
assert_array_almost_equal(mlpacf.pacf100.ravel(), pacfyw, 1)
pacfyw = stattools.pacf_yw(x1000, 20, method="mle")
assert_array_almost_equal(mlpacf.pacf1000.ravel(), pacfyw, 2)
# assert False
def test_pacf_ols():
pacfols = stattools.pacf_ols(x100, 20)
assert_array_almost_equal(mlpacf.pacf100.ravel(), pacfols, 8)
pacfols = stattools.pacf_ols(x1000, 20)
assert_array_almost_equal(mlpacf.pacf1000.ravel(), pacfols, 8)
# assert False
def test_ywcoef():
assert_array_almost_equal(
mlywar.arcoef100[1:],
-regression.yule_walker(x100, 10, method="mle")[0],
8,
)
assert_array_almost_equal(
mlywar.arcoef1000[1:],
-regression.yule_walker(x1000, 20, method="mle")[0],
8,
)
@pytest.mark.smoke
def test_yule_walker_inter():
# see 1869
x = np.array([1, -1, 2, 2, 0, -2, 1, 0, -3, 0, 0])
# it works
regression.yule_walker(x, 3)
def test_duplication_matrix(reset_randomstate):
for k in range(2, 10):
m = tools.unvech(np.random.randn(k * (k + 1) // 2))
Dk = tools.duplication_matrix(k)
assert np.array_equal(vec(m), np.dot(Dk, vech(m)))
def test_elimination_matrix(reset_randomstate):
for k in range(2, 10):
m = np.random.randn(k, k)
Lk = tools.elimination_matrix(k)
assert np.array_equal(vech(m), np.dot(Lk, vec(m)))
def test_commutation_matrix(reset_randomstate):
m = np.random.randn(4, 3)
K = tools.commutation_matrix(4, 3)
assert np.array_equal(vec(m.T), np.dot(K, vec(m)))
def test_vec():
arr = np.array([[1, 2], [3, 4]])
assert np.array_equal(vec(arr), [1, 3, 2, 4])
def test_vech():
arr = np.array([[1, 2, 3], [4, 5, 6], [7, 8, 9]])
assert np.array_equal(vech(arr), [1, 4, 7, 5, 8, 9])
def test_ar_transparams():
arr = np.array(
[-1000.0, -100.0, -10.0, 1.0, 0.0, 1.0, 10.0, 100.0, 1000.0]
)
assert not np.isnan(tools._ar_transparams(arr)).any()
class TestLagmat:
@classmethod
def setup_class(cls):
data = macrodata.load_pandas()
cls.macro_df = data.data[["year", "quarter", "realgdp", "cpi"]]
cols = list(cls.macro_df.columns)
cls.realgdp_loc = cols.index("realgdp")
cls.cpi_loc = cols.index("cpi")
np.random.seed(12345)
cls.random_data = np.random.randn(100)
index = [
str(int(yr)) + "-Q" + str(int(qu))
for yr, qu in zip(cls.macro_df.year, cls.macro_df.quarter)
]
cls.macro_df.index = index
cls.series = cls.macro_df.cpi
def test_add_lag_insert(self):
data = self.macro_df.values
nddata = data.astype(float)
lagmat = stattools.lagmat(nddata[:, 2], 3, trim="Both")
results = np.column_stack((nddata[3:, :3], lagmat, nddata[3:, -1]))
lag_data = tools.add_lag(data, self.realgdp_loc, 3)
assert_equal(lag_data, results)
def test_add_lag_noinsert(self):
data = self.macro_df.values
nddata = data.astype(float)
lagmat = stattools.lagmat(nddata[:, 2], 3, trim="Both")
results = np.column_stack((nddata[3:, :], lagmat))
lag_data = tools.add_lag(data, self.realgdp_loc, 3, insert=False)
assert_equal(lag_data, results)
def test_add_lag_noinsert_atend(self):
data = self.macro_df.values
nddata = data.astype(float)
lagmat = stattools.lagmat(nddata[:, -1], 3, trim="Both")
results = np.column_stack((nddata[3:, :], lagmat))
lag_data = tools.add_lag(data, self.cpi_loc, 3, insert=False)
assert_equal(lag_data, results)
# should be the same as insert
lag_data2 = tools.add_lag(data, self.cpi_loc, 3, insert=True)
assert_equal(lag_data2, results)
def test_add_lag_ndarray(self):
data = self.macro_df.values
nddata = data.astype(float)
lagmat = stattools.lagmat(nddata[:, 2], 3, trim="Both")
results = np.column_stack((nddata[3:, :3], lagmat, nddata[3:, -1]))
lag_data = tools.add_lag(nddata, 2, 3)
assert_equal(lag_data, results)
def test_add_lag_noinsert_ndarray(self):
data = self.macro_df.values
nddata = data.astype(float)
lagmat = stattools.lagmat(nddata[:, 2], 3, trim="Both")
results = np.column_stack((nddata[3:, :], lagmat))
lag_data = tools.add_lag(nddata, 2, 3, insert=False)
assert_equal(lag_data, results)
def test_add_lag_noinsertatend_ndarray(self):
data = self.macro_df.values
nddata = data.astype(float)
lagmat = stattools.lagmat(nddata[:, -1], 3, trim="Both")
results = np.column_stack((nddata[3:, :], lagmat))
lag_data = tools.add_lag(nddata, 3, 3, insert=False)
assert_equal(lag_data, results)
# should be the same as insert also check negative col number
lag_data2 = tools.add_lag(nddata, -1, 3, insert=True)
assert_equal(lag_data2, results)
def test_sep_return(self):
data = self.random_data
n = data.shape[0]
lagmat, leads = stattools.lagmat(data, 3, trim="none", original="sep")
expected = np.zeros((n + 3, 4))
for i in range(4):
expected[i : i + n, i] = data
expected_leads = expected[:, :1]
expected_lags = expected[:, 1:]
assert_equal(expected_lags, lagmat)
assert_equal(expected_leads, leads)
def test_add_lag1d(self):
data = self.random_data
lagmat = stattools.lagmat(data, 3, trim="Both")
results = np.column_stack((data[3:], lagmat))
lag_data = tools.add_lag(data, lags=3, insert=True)
assert_equal(results, lag_data)
# add index
data = data[:, None]
lagmat = stattools.lagmat(data, 3, trim="Both") # test for lagmat too
results = np.column_stack((data[3:], lagmat))
lag_data = tools.add_lag(data, lags=3, insert=True)
assert_equal(results, lag_data)
def test_add_lag1d_drop(self):
data = self.random_data
lagmat = stattools.lagmat(data, 3, trim="Both")
lag_data = tools.add_lag(data, lags=3, drop=True, insert=True)
assert_equal(lagmat, lag_data)
# no insert, should be the same
lag_data = tools.add_lag(data, lags=3, drop=True, insert=False)
assert_equal(lagmat, lag_data)
def test_add_lag1d_struct(self):
data = np.zeros(100, dtype=[("variable", float)])
nddata = self.random_data
data["variable"] = nddata
lagmat = stattools.lagmat(nddata, 3, trim="Both", original="in")
lag_data = tools.add_lag(data, 0, lags=3, insert=True)
assert_equal(lagmat, lag_data)
lag_data = tools.add_lag(data, 0, lags=3, insert=False)
assert_equal(lagmat, lag_data)
lag_data = tools.add_lag(data, lags=3, insert=True)
assert_equal(lagmat, lag_data)
def test_add_lag_1d_drop_struct(self):
data = np.zeros(100, dtype=[("variable", float)])
nddata = self.random_data
data["variable"] = nddata
lagmat = stattools.lagmat(nddata, 3, trim="Both")
lag_data = tools.add_lag(data, lags=3, drop=True)
assert_equal(lagmat, lag_data)
def test_add_lag_drop_insert(self):
data = self.macro_df.values
nddata = data.astype(float)
lagmat = stattools.lagmat(nddata[:, 2], 3, trim="Both")
results = np.column_stack((nddata[3:, :2], lagmat, nddata[3:, -1]))
lag_data = tools.add_lag(data, self.realgdp_loc, 3, drop=True)
assert_equal(lag_data, results)
def test_add_lag_drop_noinsert(self):
data = self.macro_df.values
nddata = data.astype(float)
lagmat = stattools.lagmat(nddata[:, 2], 3, trim="Both")
results = np.column_stack((nddata[3:, np.array([0, 1, 3])], lagmat))
lag_data = tools.add_lag(
data, self.realgdp_loc, 3, insert=False, drop=True
)
assert_equal(lag_data, results)
def test_dataframe_without_pandas(self):
data = self.macro_df
both = stattools.lagmat(data, 3, trim="both", original="in")
both_np = stattools.lagmat(data.values, 3, trim="both", original="in")
assert_equal(both, both_np)
lags = stattools.lagmat(data, 3, trim="none", original="ex")
lags_np = stattools.lagmat(data.values, 3, trim="none", original="ex")
assert_equal(lags, lags_np)
lags, lead = stattools.lagmat(data, 3, trim="forward", original="sep")
lags_np, lead_np = stattools.lagmat(
data.values, 3, trim="forward", original="sep"
)
assert_equal(lags, lags_np)
assert_equal(lead, lead_np)
def test_dataframe_both(self):
data = self.macro_df
columns = list(data.columns)
n = data.shape[0]
values = np.zeros((n + 3, 16))
values[:n, :4] = data.values
for lag in range(1, 4):
new_cols = [col + ".L." + str(lag) for col in data]
columns.extend(new_cols)
values[lag : n + lag, 4 * lag : 4 * (lag + 1)] = data.values
index = data.index
values = values[:n]
expected = pd.DataFrame(values, columns=columns, index=index)
expected = expected.iloc[3:]
both = stattools.lagmat(
self.macro_df, 3, trim="both", original="in", use_pandas=True
)
assert_frame_equal(both, expected)
lags = stattools.lagmat(
self.macro_df, 3, trim="both", original="ex", use_pandas=True
)
assert_frame_equal(lags, expected.iloc[:, 4:])
lags, lead = stattools.lagmat(
self.macro_df, 3, trim="both", original="sep", use_pandas=True
)
assert_frame_equal(lags, expected.iloc[:, 4:])
assert_frame_equal(lead, expected.iloc[:, :4])
def test_too_few_observations(self):
assert_raises(
ValueError, stattools.lagmat, self.macro_df, 300, use_pandas=True
)
assert_raises(ValueError, stattools.lagmat, self.macro_df.values, 300)
def test_unknown_trim(self):
assert_raises(
ValueError,
stattools.lagmat,
self.macro_df,
3,
trim="unknown",
use_pandas=True,
)
assert_raises(
ValueError,
stattools.lagmat,
self.macro_df.values,
3,
trim="unknown",
)
def test_dataframe_forward(self):
data = self.macro_df
columns = list(data.columns)
n = data.shape[0]
values = np.zeros((n + 3, 16))
values[:n, :4] = data.values
for lag in range(1, 4):
new_cols = [col + ".L." + str(lag) for col in data]
columns.extend(new_cols)
values[lag : n + lag, 4 * lag : 4 * (lag + 1)] = data.values
index = data.index
values = values[:n]
expected = pd.DataFrame(values, columns=columns, index=index)
both = stattools.lagmat(
self.macro_df, 3, trim="forward", original="in", use_pandas=True
)
assert_frame_equal(both, expected)
lags = stattools.lagmat(
self.macro_df, 3, trim="forward", original="ex", use_pandas=True
)
assert_frame_equal(lags, expected.iloc[:, 4:])
lags, lead = stattools.lagmat(
self.macro_df, 3, trim="forward", original="sep", use_pandas=True
)
assert_frame_equal(lags, expected.iloc[:, 4:])
assert_frame_equal(lead, expected.iloc[:, :4])
def test_pandas_errors(self):
assert_raises(
ValueError,
stattools.lagmat,
self.macro_df,
3,
trim="none",
use_pandas=True,
)
assert_raises(
ValueError,
stattools.lagmat,
self.macro_df,
3,
trim="backward",
use_pandas=True,
)
assert_raises(
ValueError,
stattools.lagmat,
self.series,
3,
trim="none",
use_pandas=True,
)
assert_raises(
ValueError,
stattools.lagmat,
self.series,
3,
trim="backward",
use_pandas=True,
)
def test_series_forward(self):
expected = pd.DataFrame(
index=self.series.index,
columns=["cpi", "cpi.L.1", "cpi.L.2", "cpi.L.3"],
)
expected["cpi"] = self.series
for lag in range(1, 4):
expected["cpi.L." + str(int(lag))] = self.series.shift(lag)
expected = expected.fillna(0.0)
both = stattools.lagmat(
self.series, 3, trim="forward", original="in", use_pandas=True
)
assert_frame_equal(both, expected)
lags = stattools.lagmat(
self.series, 3, trim="forward", original="ex", use_pandas=True
)
assert_frame_equal(lags, expected.iloc[:, 1:])
lags, lead = stattools.lagmat(
self.series, 3, trim="forward", original="sep", use_pandas=True
)
assert_frame_equal(lead, expected.iloc[:, :1])
assert_frame_equal(lags, expected.iloc[:, 1:])
def test_series_both(self):
expected = pd.DataFrame(
index=self.series.index,
columns=["cpi", "cpi.L.1", "cpi.L.2", "cpi.L.3"],
)
expected["cpi"] = self.series
for lag in range(1, 4):
expected["cpi.L." + str(int(lag))] = self.series.shift(lag)
expected = expected.iloc[3:]
both = stattools.lagmat(
self.series, 3, trim="both", original="in", use_pandas=True
)
assert_frame_equal(both, expected)
lags = stattools.lagmat(
self.series, 3, trim="both", original="ex", use_pandas=True
)
assert_frame_equal(lags, expected.iloc[:, 1:])
lags, lead = stattools.lagmat(
self.series, 3, trim="both", original="sep", use_pandas=True
)
assert_frame_equal(lead, expected.iloc[:, :1])
assert_frame_equal(lags, expected.iloc[:, 1:])
def test_range_index_columns(self):
# GH 8377
df = pd.DataFrame(np.arange(200).reshape((-1, 2)))
df.columns = pd.RangeIndex(2)
result = stattools.lagmat(df, maxlag=2, use_pandas=True)
assert result.shape == (100, 4)
assert list(result.columns) == ["0.L.1", "1.L.1", "0.L.2", "1.L.2"]
def test_duplicate_column_names(self):
# GH 8377
df = pd.DataFrame(np.arange(200).reshape((-1, 2)))
df.columns = [0, "0"]
with pytest.raises(ValueError, match="Columns names must be"):
stattools.lagmat(df, maxlag=2, use_pandas=True)
ANNUAL = "A" if PD_LT_2_2_0 else YEAR_END
freqs = [
YEAR_END,
f"{ANNUAL}-MAR",
QUARTER_END,
"QS",
"QS-APR",
"W",
"W-MON",
"B",
"D",
"h",
]
expected = [1, 1, 4, 4, 4, 52, 52, 5, 7, 24]
freq_expected = [(f, e) for f, e in zip(freqs, expected)]
@pytest.mark.parametrize("freq_expected", freq_expected)
def test_freq_to_period(freq_expected):
freq, expected = freq_expected
assert_equal(tools.freq_to_period(freq), expected)
assert_equal(tools.freq_to_period(to_offset(freq)), expected)
class TestDetrend:
@classmethod
def setup_class(cls):
cls.data_1d = np.arange(5.0)
cls.data_2d = np.arange(10.0).reshape(5, 2)
def test_detrend_1d(self):
data = self.data_1d
assert_array_almost_equal(
tools.detrend(data, order=1), np.zeros_like(data)
)
assert_array_almost_equal(
tools.detrend(data, order=0), [-2, -1, 0, 1, 2]
)
def test_detrend_2d(self):
data = self.data_2d
assert_array_almost_equal(
tools.detrend(data, order=1, axis=0), np.zeros_like(data)
)
assert_array_almost_equal(
tools.detrend(data, order=0, axis=0),
[[-4, -4], [-2, -2], [0, 0], [2, 2], [4, 4]],
)
assert_array_almost_equal(
tools.detrend(data, order=0, axis=1),
[[-0.5, 0.5], [-0.5, 0.5], [-0.5, 0.5], [-0.5, 0.5], [-0.5, 0.5]],
)
def test_detrend_series(self):
data = pd.Series(self.data_1d, name="one")
detrended = tools.detrend(data, order=1)
assert_array_almost_equal(detrended.values, np.zeros_like(data))
assert_series_equal(detrended, pd.Series(detrended.values, name="one"))
detrended = tools.detrend(data, order=0)
assert_array_almost_equal(
detrended.values, pd.Series([-2, -1, 0, 1, 2])
)
assert_series_equal(detrended, pd.Series(detrended.values, name="one"))
def test_detrend_dataframe(self):
columns = ["one", "two"]
index = [c for c in "abcde"]
data = pd.DataFrame(self.data_2d, columns=columns, index=index)
detrended = tools.detrend(data, order=1, axis=0)
assert_array_almost_equal(detrended.values, np.zeros_like(data))
assert_frame_equal(
detrended,
pd.DataFrame(detrended.values, columns=columns, index=index),
)
detrended = tools.detrend(data, order=0, axis=0)
assert_array_almost_equal(
detrended.values, [[-4, -4], [-2, -2], [0, 0], [2, 2], [4, 4]]
)
assert_frame_equal(
detrended,
pd.DataFrame(detrended.values, columns=columns, index=index),
)
detrended = tools.detrend(data, order=0, axis=1)
assert_array_almost_equal(
detrended.values,
[[-0.5, 0.5], [-0.5, 0.5], [-0.5, 0.5], [-0.5, 0.5], [-0.5, 0.5]],
)
assert_frame_equal(
detrended,
pd.DataFrame(detrended.values, columns=columns, index=index),
)
def test_detrend_dim_too_large(self):
assert_raises(NotImplementedError, tools.detrend, np.ones((3, 3, 3)))
class TestAddTrend:
@classmethod
def setup_class(cls):
cls.n = 200
cls.arr_1d = np.arange(float(cls.n))
cls.arr_2d = np.tile(np.arange(float(cls.n))[:, None], 2)
cls.c = np.ones(cls.n)
cls.t = np.arange(1.0, cls.n + 1)
def test_series(self):
s = pd.Series(self.arr_1d)
appended = tools.add_trend(s)
expected = pd.DataFrame(s)
expected["const"] = self.c
assert_frame_equal(expected, appended)
prepended = tools.add_trend(s, prepend=True)
expected = pd.DataFrame(s)
expected.insert(0, "const", self.c)
assert_frame_equal(expected, prepended)
s = pd.Series(self.arr_1d)
appended = tools.add_trend(s, trend="ct")
expected = pd.DataFrame(s)
expected["const"] = self.c
expected["trend"] = self.t
assert_frame_equal(expected, appended)
def test_dataframe(self):
df = pd.DataFrame(self.arr_2d)
appended = tools.add_trend(df)
expected = df.copy()
expected["const"] = self.c
assert_frame_equal(expected, appended)
prepended = tools.add_trend(df, prepend=True)
expected = df.copy()
expected.insert(0, "const", self.c)
assert_frame_equal(expected, prepended)
df = pd.DataFrame(self.arr_2d)
appended = tools.add_trend(df, trend="t")
expected = df.copy()
expected["trend"] = self.t
assert_frame_equal(expected, appended)
df = pd.DataFrame(self.arr_2d)
appended = tools.add_trend(df, trend="ctt")
expected = df.copy()
expected["const"] = self.c
expected["trend"] = self.t
expected["trend_squared"] = self.t ** 2
assert_frame_equal(expected, appended)
def test_duplicate_const(self):
assert_raises(
ValueError,
tools.add_trend,
x=self.c,
trend="c",
has_constant="raise",
)
assert_raises(
ValueError,
tools.add_trend,
x=self.c,
trend="ct",
has_constant="raise",
)
df = pd.DataFrame(self.c)
assert_raises(
ValueError, tools.add_trend, x=df, trend="c", has_constant="raise"
)
assert_raises(
ValueError, tools.add_trend, x=df, trend="ct", has_constant="raise"
)
skipped = tools.add_trend(self.c, trend="c")
assert_equal(skipped, self.c[:, None])
skipped_const = tools.add_trend(
self.c, trend="ct", has_constant="skip"
)
expected = np.vstack((self.c, self.t)).T
assert_equal(skipped_const, expected)
added = tools.add_trend(self.c, trend="c", has_constant="add")
expected = np.vstack((self.c, self.c)).T
assert_equal(added, expected)
added = tools.add_trend(self.c, trend="ct", has_constant="add")
expected = np.vstack((self.c, self.c, self.t)).T
assert_equal(added, expected)
def test_dataframe_duplicate(self):
df = pd.DataFrame(self.arr_2d, columns=["const", "trend"])
tools.add_trend(df, trend="ct")
tools.add_trend(df, trend="ct", prepend=True)
def test_array(self):
base = np.vstack((self.arr_1d, self.c, self.t, self.t ** 2)).T
assert_equal(tools.add_trend(self.arr_1d), base[:, :2])
assert_equal(tools.add_trend(self.arr_1d, trend="t"), base[:, [0, 2]])
assert_equal(tools.add_trend(self.arr_1d, trend="ct"), base[:, :3])
assert_equal(tools.add_trend(self.arr_1d, trend="ctt"), base)
base = np.hstack(
(
self.c[:, None],
self.t[:, None],
self.t[:, None] ** 2,
self.arr_2d,
)
)
assert_equal(
tools.add_trend(self.arr_2d, prepend=True), base[:, [0, 3, 4]]
)
assert_equal(
tools.add_trend(self.arr_2d, trend="t", prepend=True),
base[:, [1, 3, 4]],
)
assert_equal(
tools.add_trend(self.arr_2d, trend="ct", prepend=True),
base[:, [0, 1, 3, 4]],
)
assert_equal(
tools.add_trend(self.arr_2d, trend="ctt", prepend=True), base
)
def test_unknown_trend(self):
assert_raises(
ValueError, tools.add_trend, x=self.arr_1d, trend="unknown"
)
def test_trend_n(self):
assert_equal(tools.add_trend(self.arr_1d, "n"), self.arr_1d)
assert tools.add_trend(self.arr_1d, "n") is not self.arr_1d
assert_equal(tools.add_trend(self.arr_2d, "n"), self.arr_2d)
assert tools.add_trend(self.arr_2d, "n") is not self.arr_2d
class TestLagmat2DS:
@classmethod
def setup_class(cls):
data = macrodata.load_pandas()
cls.macro_df = data.data[["year", "quarter", "realgdp", "cpi"]]
np.random.seed(12345)
cls.random_data = np.random.randn(100)
index = [
str(int(yr)) + "-Q" + str(int(qu))
for yr, qu in zip(cls.macro_df.year, cls.macro_df.quarter)
]
cls.macro_df.index = index
cls.series = cls.macro_df.cpi
@staticmethod
def _prepare_expected(data, lags, trim="front"):
t, k = data.shape
expected = np.zeros((t + lags, (lags + 1) * k))
for col in range(k):
for i in range(lags + 1):
if i < lags:
expected[i : -lags + i, (lags + 1) * col + i] = data[
:, col
]
else:
expected[i:, (lags + 1) * col + i] = data[:, col]
if trim == "front":
expected = expected[:-lags]
return expected
def test_lagmat2ds_numpy(self):
data = self.macro_df
npdata = data.values
lagmat = stattools.lagmat2ds(npdata, 2)
expected = self._prepare_expected(npdata, 2)
assert_array_equal(lagmat, expected)
lagmat = stattools.lagmat2ds(npdata[:, :2], 3)
expected = self._prepare_expected(npdata[:, :2], 3)
assert_array_equal(lagmat, expected)
npdata = self.series.values
lagmat = stattools.lagmat2ds(npdata, 5)
expected = self._prepare_expected(npdata[:, None], 5)
assert_array_equal(lagmat, expected)
def test_lagmat2ds_pandas(self):
data = self.macro_df
lagmat = stattools.lagmat2ds(data, 2)
expected = self._prepare_expected(data.values, 2)
assert_array_equal(lagmat, expected)
lagmat = stattools.lagmat2ds(data.iloc[:, :2], 3, trim="both")
expected = self._prepare_expected(data.values[:, :2], 3)
expected = expected[3:]
assert_array_equal(lagmat, expected)
data = self.series
lagmat = stattools.lagmat2ds(data, 5)
expected = self._prepare_expected(data.values[:, None], 5)
assert_array_equal(lagmat, expected)
def test_lagmat2ds_use_pandas(self):
data = self.macro_df
lagmat = stattools.lagmat2ds(data, 2, use_pandas=True)
expected = self._prepare_expected(data.values, 2)
cols = []
for c in data:
for lags in range(3):
if lags == 0:
cols.append(c)
else:
cols.append(c + ".L." + str(lags))
expected = pd.DataFrame(expected, index=data.index, columns=cols)
assert_frame_equal(lagmat, expected)
lagmat = stattools.lagmat2ds(
data.iloc[:, :2], 3, use_pandas=True, trim="both"
)
expected = self._prepare_expected(data.values[:, :2], 3)
cols = []
for c in data.iloc[:, :2]:
for lags in range(4):
if lags == 0:
cols.append(c)
else:
cols.append(c + ".L." + str(lags))
expected = pd.DataFrame(expected, index=data.index, columns=cols)
expected = expected.iloc[3:]
assert_frame_equal(lagmat, expected)
data = self.series
lagmat = stattools.lagmat2ds(data, 5, use_pandas=True)
expected = self._prepare_expected(data.values[:, None], 5)
cols = []
c = data.name
for lags in range(6):
if lags == 0:
cols.append(c)
else:
cols.append(c + ".L." + str(lags))
expected = pd.DataFrame(expected, index=data.index, columns=cols)
assert_frame_equal(lagmat, expected)
def test_3d_error(self):
data = np.array(2)
with pytest.raises(ValueError):
stattools.lagmat2ds(data, 5)
data = np.zeros((100, 2, 2))
with pytest.raises(ValueError):
stattools.lagmat2ds(data, 5)
def test_grangercausality():
data = np.random.rand(100, 2)
with pytest.warns(FutureWarning, match="verbose"):
out = stattools.grangercausalitytests(data, maxlag=2, verbose=False)
result, models = out[1]
res2down, res2djoint, rconstr = models
assert res2djoint.centered_tss is not res2djoint.uncentered_tss